dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002395_1|CGC4
Gene ID: MGYG000002395_00169
Location and strand information: 222459 - 224573 (+)
Family: GH43|GH43_27
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4306
Protein molecular weight: 76278.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002395_1|CGC4
Gene ID: MGYG000002395_00170
Location and strand information: 224601 - 225674 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional regulator DegA

Gene clsuter ID: MGYG000002395_1|CGC4
Gene ID: MGYG000002395_00171
Location and strand information: 226014 - 227033 (+)
Family: CBM42|GH43_26
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 4.3267
Protein molecular weight: 37521.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002395_1|CGC4
Gene ID: MGYG000002395_00172
Location and strand information: 227253 - 228524 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002395_1|CGC4
Gene ID: MGYG000002395_00173
Location and strand information: 228524 - 229438 (+)
Family: 3.A.1.1.49
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000002395_1|CGC4
Gene ID: MGYG000002395_00174
Location and strand information: 229441 - 230337 (+)
Family: 3.A.1.1.36
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002395_1|CGC4
Gene ID: MGYG000002395_00175
Location and strand information: 230454 - 230927 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002395_1|CGC4
Gene ID: MGYG000002395_00176
Location and strand information: 231060 - 232124 (+)
Family: GH43_22|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5986
Protein molecular weight: 40035.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002395_1|CGC4
Gene ID: MGYG000002395_00177
Location and strand information: 232249 - 234555 (-)
Family: GT51
Protein type: CAZyme
Protein description: Monofunctional biosynthetic peptidoglycan transglycosylase
Protein isoelectric point: 5.9509
Protein molecular weight: 82122.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinoxylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002395_00169	hypothetical protein	CAZyme	222459	224573	+	GH43\| GH43_27
MGYG000002395_00170	HTH-type transcriptional regulator DegA	TF	224601	225674	+	LacI
MGYG000002395_00171	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	226014	227033	+	CBM42\| GH43_26
MGYG000002395_00172	hypothetical protein	STP	227253	228524	+	SBP_bac_1
MGYG000002395_00173	Lactose transport system permease protein LacF	TC	228524	229438	+	3.A.1.1.49
MGYG000002395_00174	L-arabinose transport system permease protein AraQ	TC	229441	230337	+	3.A.1.1.36
MGYG000002395_00175	hypothetical protein	null	230454	230927	+	No domain
MGYG000002395_00176	hypothetical protein	CAZyme	231060	232124	+	GH43_22\| GH43
MGYG000002395_00177	Monofunctional biosynthetic peptidoglycan transglycosylase	CAZyme	232249	234555	-	GT51
Protein ID	Protein Name	Type	Start	End	Strand	Signature